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StructmRNA a BERT based model with dual level and conditional masking for mRNA representation

StructmRNA uses advanced computational techniques to analyze and embed mRNA sequences and structures. It employs a comparative framework for RNA degradation prediction using BERT with a dual-level...

Evaluating the effectiveness of quantitative pupillometry in assessing dynamic aerobic training intensity

Drew, M. K., Raysmith, B. P. & Charlton, P. C. Injuries impair the chance of successful performance by sportspeople: a systematic review. Br. J. Sports Med. 51...

Integrative spatial and genomic analysis of tumor heterogeneity with Tumoroscope

Breast cancer samplesThe breast tumor samples originating from an untreated invasive ductal carcinoma patient, specifically identified as HER2 positive, were obtained from the Department of Clinical Pathology...

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Toward learning a foundational representation of cells and genes

Toward learning a foundational representation of cells and genes

How fast can antibiotic resistance evolve?

Antibiotic resistance is one of the biggest global health challenges. Our most potent antibiotics become less effective as bacteria mutate and develop new defense...

Bacteria encode hidden genes outside their genome–do we?

A "loopy" discovery in bacteria is raising fundamental questions about the makeup of our own genome -- and revealing a potential wellspring of material...

Rp3: Ribosome profiling-assisted proteogenomics improves coverage and confidence during microprotein discovery

Reference-guided transcriptome assembliesTo maintain consistency with the previous analysis, we obtained the GTF files produced by Martinez et al. (2023)26 for brown, beige, and...

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