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Episode 84 – Animal welfare… on the dairy farm – Naturally Speaking

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As consumers, we hope that the animals that provide our meat, milk, eggs, etc. are well cared-for and are kept in good welfare conditions....
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SnapFISH-IMPUTE: an imputation method for multiplexed DNA FISH data

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SnapFISH-IMPUTEMultiplexed DNA FISH data measure the three-dimensional Euclidean coordinates of consecutive loci on chromosomes. Depending on the ploidy and the cell cycle, it is...
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ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing | BMC Bioinformatics

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DatasetsWe created four artificial datasets to benchmark our pipeline. The first dataset is used to establish the optimal minCallers threshold values (minCallers dataset). The...
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Episode 85 – Dog phone and the dawn of the Doggoverse – Naturally Speaking

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Have you ever wondered what animal internet would look like? In this episode, Naturally Speaking’s Mohammad Saiful Islam Sajib and Taya Forde interview Dr....
HEALTHY

Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen

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Qi, Q. et al. Diversity and clonal selection in the human T-cell repertoire. Proc. Natl Acad. Sci. USA 111, 13139–13144 (2014).Article  ...
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