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A gene selection algorithm for microarray cancer classification using an improved particle swarm optimization

DatasetsIn this manuscript, eight microarray datasets are utilized for various types of cancer: Leukemia, Brain Cancer, Colon Cancer, SRBCT (Small Round Blue Cell Tumors),...

Discovering the lipid metabolism-related hub genes of HCC-treated samples with PPARα agonist through weighted correlation network analysis

Screening of DEGSA total of 24 samples from the GEO dataset (GSE17251) were used for identifying the DEGs using the R version (4.3.2). Overall,...

TIANA: transcription factors cooperativity inference analysis with neural attention | BMC Bioinformatics

Overview of TIANAFigure 1A shows the overall model architecture and training strategy. TIANA consists of two primary steps: In the first step (denoted as Training...

An ontology-based knowledge graph for representing interactions involving RNA molecules

Bartel, D. P. & Chen, C.-Z. Micromanagers of gene expression: the potentially widespread influence of metazoan micrornas. Nature Reviews Genetics 5, 396–400, https://doi.org/10.1038/nrg1328 (2004).Article  ...

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