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expHRD: an individualized, transcriptome-based prediction model for homologous recombination deficiency assessment in cancer | BMC Bioinformatics

Development of the HRD prediction model using the transcriptomeA comprehensive dataset of 10,068 samples representing 34 cancer types from the TCGA-pan cancer cohort, encompassing...

Breast cancer, viruses, and human leukocyte antigen (HLA)

Breast cancer is the most common cancer affecting women worldwide1. Several risk factors have been identified, including family history of breast cancer, dense breast...

Conversations with an R Jedi – Naturally Speaking

Episode 41: Conversations with an R Jedi https://naturallyspeaking.blog/wp-content/uploads/2016/06/hadley_wickham_june_17.mp3 As much as we love it or hate it, programming plays an increasingly important part in biological research. But, saving...

Setting the morphologic quality limits enabling accurate classification of charred archaeological grape seeds

Modern plant materialA total of 365 seeds from two cultivars were sampled from the vineyard collection at Ariel University, Israel: the endogenous Israeli variety...

Against the Tide—A dialogue with Rita Colwell about shifting paradigms – Naturally Speaking

Behind every scientific achievement lies a complex journey, marked by trials, discoveries, and steadfast resolve. The career of distinguished University Professor Rita Colwell (@rcolwell2),...

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